FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005092801

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005092801
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences63293546
Sequences flagged as poor quality0
Sequence length26
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGGACTG155250.017.2981831
ATGCGAT175500.017.268451
TGAGCCG183350.017.140091
GACCTGG203250.016.8939461
GCGCGAT151450.016.8934781
GAAATGA268800.016.8709721
CCTTACG223150.016.8440971
CAATGGA239200.016.830888
CCCTCCT297100.016.8260211
CGCTGGA228300.016.7007061
CGGAGCT159850.016.7002811
GGCGACT140400.016.6344171
GAATGAA184100.016.6301961
ACGAGCC180250.016.6080741
TGCTACC232700.016.5955351
CCACTAC284000.016.5878621
CTTGGCT242500.016.5476761
GGGAGAT208600.016.5325851
TACGGAT195800.016.5201951
TGGCTGG217800.016.51391
Produced by FastQC (version 0.11.5)