FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005092804

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005092804
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences53908887
Sequences flagged as poor quality0
Sequence length8
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTCTATG1504190727.90246253831952No Hit
CAATACCC1486826527.580359802271566No Hit
ACCACGAA1486548427.575201098104657No Hit
GTGGGTGT857212715.901138897562475No Hit
CAATACCA655260.12154953226914145No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)