FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005092810

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005092810
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences52951081
Sequences flagged as poor quality0
Sequence length26
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGGACTG157750.017.5761341
CCGGTAG169150.017.355441
GGGACCT145700.017.1556131
TGGCTGG237100.017.1232811
TGCTACC209550.017.1072351
TAGTTGG209550.017.0213171
ATCGAGT157950.016.9522841
CATGGCG247850.016.7559051
ACTGAAC130200.016.7319451
GGAACTT146750.016.6443581
GACCTGG163250.016.5979821
CGCTTCA185650.016.594161
CTCACAC228800.016.5422521
CAATGGA161600.016.5341018
AGACGTT172750.016.3568571
GGAATAA272900.016.3357321
ACGAGGA170700.016.3306311
GCGCGAT104400.016.3255791
GATGCTA194500.016.312221
CCGTACT131050.016.2723271
Produced by FastQC (version 0.11.5)