FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005092812

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005092812
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences30250512
Sequences flagged as poor quality0
Sequence length26
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCGAATG147200.018.1366318
GGCGACT85600.018.0085811
CAATGGA147650.017.6953498
GGGACCT84800.017.6594261
GAATGCT135650.017.5062610
ATTGGTG142500.017.5008051
GCGACCA116200.017.4501131
CGAATGC136050.017.440159
ATCGAGT108200.017.2518231
GACTAAC103550.017.1764051
TATTACC114450.017.1662851
TAGCCGG103600.017.0522441
CTCGAAA76650.017.0313451
TGCACCT143150.017.0020521
ACTTGAC89100.016.9901710
GCAGTTA156650.016.9161761
GGTATTG120750.016.8754181
TGGGCGT87250.016.831051
TACGCCG88050.016.82939110
AGAATAG113450.016.7885441
Produced by FastQC (version 0.11.5)