FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005092816

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005092816
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences31653526
Sequences flagged as poor quality0
Sequence length26
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCGAATG160700.017.9710188
CAATGGA152150.017.7912968
GGGACCT87200.017.4923531
GACTAAC112950.017.4185921
TGCACCT150250.017.3881591
GAATGCT146450.017.37757110
CGAATGC147050.017.3542969
GCGACCA119900.017.3515821
ATTGGTG145000.017.341721
GGCGACT86400.017.214411
TATTACC127700.017.1533181
ATCGAGT113100.017.1390251
TACGCCG92100.017.00289210
AGAATAG121450.016.9654221
CTCGAAA80500.016.8359781
GGTATTG124050.016.803351
GAAACTC188350.016.8021851
ACTTGAC88900.016.7150510
CTCGAGG79850.016.6723981
AAACCTG115150.016.651491
Produced by FastQC (version 0.11.5)