FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005092819

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005092819
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences73561983
Sequences flagged as poor quality0
Sequence length26
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAATGAA284100.017.4068451
TGGCTGG325750.017.3030381
CAATGGA294500.017.1786698
CGACCTT310750.017.1597291
CTTAGGA268200.017.1334611
GGGCATC239700.017.038221
CCGGGAT187500.016.8577141
ACTGAAC195300.016.8553771
GACCTGG253550.016.715051
ACTTGAC223000.016.7081710
GCGCGAT157600.016.7048471
AAACCTG187750.016.6860921
GATCTAG254200.016.625091
TCTATTG311300.016.6217291
GACTAAC172700.016.5879821
CTCGAAA196050.016.5817131
CGAGAAG302700.016.568561
GGGAGAT261750.016.5315151
CGGACAC222150.016.502151
CTTTGCG224050.016.496141
Produced by FastQC (version 0.11.5)