FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005092822

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005092822
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences48138179
Sequences flagged as poor quality0
Sequence length26
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCGGTAG226950.018.210851
AGAAACC176250.017.3163648
GACCTGG173150.017.1698861
CGCTGGA185750.017.141121
CGGACTG133400.017.1212431
CCGGGAT133700.017.0080321
GCGCGAT116150.017.003681
CGTGAGC152650.016.9994771
GACTAAC149950.016.8921031
TACTGAC140200.016.89054110
CCCTCCT222150.016.8532831
TATGCCC159400.016.8065811
ACTGAAC126650.016.7467461
CCACCTA189100.016.715831
CTGCCTA161700.016.7097641
GGGACCT108000.016.6849941
CATGGCG190800.016.645511
CTCGAAA118250.016.6171461
GAACCTA144800.016.5882051
ACGAGCC138850.016.5500451
Produced by FastQC (version 0.11.5)