FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005092829

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005092829
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences37696708
Sequences flagged as poor quality0
Sequence length26
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGGACCT120550.017.5152781
TGAGCCG113100.017.4662861
GGCGACT87350.016.9356271
CCGGGAT88650.016.9242151
ACTGAAC97950.016.879691
ATCGAGT99300.016.8415891
CAATGGA135000.016.829228
GATGAAA115300.016.8033681
GCGCGAT75400.016.7676331
CGTTGGG182100.016.6813371
TACGGAT125050.016.6610221
ACTGATG80800.016.525931
TGCGGGT109350.016.5102791
TGCTACC140250.016.4956251
TGGGCGT106600.016.4764391
CCTTACG107450.016.3740251
CTAATGG114800.016.3363651
AGAAACC146100.016.3035058
ATCCGAA184000.016.2535951
GAATGAA99600.016.2184471
Produced by FastQC (version 0.11.5)