FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005092832

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005092832
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences47989656
Sequences flagged as poor quality0
Sequence length26
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCGGTAG229900.018.1715071
CGGACTG135350.017.4389041
CGTGAGC158600.017.2472381
CCGGGAT129450.017.2138731
ACTGAAC132550.017.1583751
TACTGAC135100.017.0099710
CGCTGGA184550.017.0006641
TATGCCC159600.016.9762421
GACCTGG171350.016.9678331
AGAAACC176100.016.9623368
GACTAAC147750.016.8214861
CATGGCG187500.016.81321
GAACCTA132050.016.6780151
TTTATGC169050.016.6603051
GGGACCT107000.016.609981
ACACCGG160750.016.5934811
ACGCAGC191050.016.516491
CCACCTA189000.016.4627971
GCGCGAT111200.016.4323331
GATCGCG126950.016.4183861
Produced by FastQC (version 0.11.5)