FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005092839

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005092839
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences46862541
Sequences flagged as poor quality0
Sequence length26
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCGGTAG222800.018.1160321
GACCTGG163400.017.2164971
CCGGGAT130000.017.2087671
AGAAACC163750.017.1907948
CGGACTG128750.017.166121
CGTGAGC157200.017.1003021
TACTGAC134150.017.05547110
GGGACCT107850.016.9783421
TATGCCC148600.016.9054971
GACTAAC145750.016.8861331
ACTGAAC122300.016.812171
CATGGCG182650.016.787251
CCCTCCT213750.016.7776551
GCGCGAT112500.016.7566011
CGCTGGA182600.016.7535111
CTGCCTA155850.016.7158341
AGGACGA96100.016.6909038
CCGTACT128650.016.526491
CTCGAAA116700.016.5220241
ATGCGAT95550.016.4531461
Produced by FastQC (version 0.11.5)