FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005092863

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005092863
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences31007397
Sequences flagged as poor quality0
Sequence length26
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACTGATG130800.018.1585941
ACGAGCC101450.017.6255151
TGATTTC145800.017.5662231
CCGGGAT99200.017.4506551
CTACCCA137250.017.137651
GCGCGAT82050.017.1125561
AGTGAAC103700.017.0973858
TTGCCGT127350.017.0799521
TGACTAG110650.017.0276931
CCTCTGA124700.016.9938131
ACCCACT122750.016.8727131
CGGACTG71050.016.8201621
CTCGAAA96000.016.7926851
ATTGGTG118200.016.7607461
AGATTGC88000.016.6941951
TACGGGC115150.016.6749131
TGGACGC108300.016.6215081
TTGGGCC99850.016.57458310
CGGACAC109600.016.533851
TTAGTTC149350.016.532641
Produced by FastQC (version 0.11.5)