FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005092867

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005092867
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences34018850
Sequences flagged as poor quality0
Sequence length26
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGGACCT147900.018.1463341
GACTAAC116800.017.8138141
CCGGTAG146000.017.6973381
ACTGAAC117900.017.6476121
ATGCGAT108750.017.605531
TGCTACC160700.017.5724121
GGAACTT147150.017.4842531
GATCGCG126350.017.2432461
ATCGAGT117200.017.1982351
GCCGAAG109150.017.1290343
ATTGGTG139250.017.1112981
CACACCT180950.017.0763761
CCTTCCC189900.016.9247461
ACTGATG81650.016.833211
AAACCTG129400.016.8290881
CAATGGA124200.016.8177098
GGGAGAT101350.016.7985671
ATGAATG115300.016.76261110
CAATGAA98700.016.6850078
CGTTGGG165800.016.6517931
Produced by FastQC (version 0.11.5)