FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005092878

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005092878
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences29129710
Sequences flagged as poor quality0
Sequence length26
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATGCGAT95700.017.8203741
ACTGATG116800.017.675481
TACCTTA140450.017.483731
CAATGGA143250.017.3948758
ACAGCCG122150.017.3926351
CTCGAGG111900.017.3589521
AAACCTG121450.017.2622781
CTTAGGA90250.017.245141
CGACCTT115600.017.218671
GACCTGG117800.017.168811
GGCGACT66350.017.1103651
CGTTCTG128650.016.9570471
ACTGCTC132200.016.9405291
CACCGAT91200.016.9395378
ATTGGAC167200.016.870081
CCGGGAT73100.016.8576761
AGGCGAA58700.016.77862410
AGACTAG85500.016.7473018
GCCGCCA77950.016.74593
TCGGGAC111850.016.6602381
Produced by FastQC (version 0.11.5)