FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005092884

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005092884
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences28813726
Sequences flagged as poor quality0
Sequence length26
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATGAAA114900.017.7602981
GATCGCG127750.017.704341
CCGGGAT93550.017.6433181
GATGCTA112850.017.5865331
CGTGCGA98550.017.451437
CTTAGGA136600.017.4287551
CGGACAC107550.017.3463671
CCGGTAG82500.017.22981
ACGAGCC107550.017.2254541
TGCGTGG118500.017.2123031
GACCAAT139450.017.122771
CGCTTCA118600.017.062841
TAAACCG105100.017.055931
TCGAATG84200.016.945778
CCTCTGA102050.016.9285371
TCGGCGC110950.016.8704998
GAATAAG129850.016.8325371
ACGATGT113600.016.8276121
GCGCTTG76950.016.73572710
GAATGAA87150.016.7007391
Produced by FastQC (version 0.11.5)