FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005092887

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005092887
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences30610032
Sequences flagged as poor quality0
Sequence length8
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCAGTTCT848226927.710748554591515No Hit
CTTTGCGG764613924.979193095910517No Hit
AAGCAGTC762348524.905184679323433No Hit
TGCACAAA648470721.184907614601645No Hit
CTTTGCGA488820.15969274386906882No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)