FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005092888

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005092888
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences38070011
Sequences flagged as poor quality0
Sequence length26
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGGGTGA255100.017.8848881
GGGACCT121700.017.844561
ACTGATG127150.017.787741
CTGCCTA189600.017.5002291
TGCTACC176450.017.3644871
CGATTGA147150.017.3075161
TTGACTT157100.017.0836681
ACGCCGA140500.017.0801051
GACTAAC106100.017.0647451
ATAGACC110150.017.0457611
GAATGAA127550.016.9869171
TGATTTC141500.016.8674951
GATGCTA156750.016.834641
CTCGAAA105600.016.8329451
ATGCGAT99550.016.8310091
AGACTAG105000.016.8277638
CCGGTAG126100.016.8252771
GACCTGG143150.016.7778931
CCCTCCT173050.016.711411
CTGCGGA121800.016.6965481
Produced by FastQC (version 0.11.5)