FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005092890

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005092890
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences31547901
Sequences flagged as poor quality0
Sequence length26
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGCGACT87700.017.953651
TCGAATG154250.017.734928
CAATGGA149000.017.7156058
GGGACCT87800.017.3749261
GAATGCT137650.017.3604110
ATTGGTG147350.017.3455621
GACTAAC113650.017.3046051
TATTACC121900.017.216681
CGAATGC138750.017.165139
TGCACCT151300.017.1571871
GCGACCA118050.017.0833151
ATCGAGT113300.017.0225541
GCAGTTA162150.017.0208931
GGTATTG124550.016.9547791
TACGCCG91300.016.95268610
AGAATAG116600.016.9096931
TAGCCGG102800.016.8831711
CGGACTG73100.016.873041
CTTAACT106350.016.8651581
CTCGAAA78250.016.8236081
Produced by FastQC (version 0.11.5)