FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005092902

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005092902
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences56051591
Sequences flagged as poor quality0
Sequence length26
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGGACTG161650.017.5413231
CCGGTAG175300.017.3736211
GGGACCT159550.017.176661
ATCGAGT172200.017.1694451
TAGTTGG215300.017.0957741
TGGCTGG246500.017.066221
CATGGCG257050.017.0116921
TGCTACC224250.016.8773271
GACCTGG178200.016.8326971
ACTGAAC143800.016.8252661
ACGAGGA194900.016.6579551
GGAACTT160050.016.5605661
GGAATAA281450.016.4288671
AGACGTT176100.016.4200211
CCGTACT137850.016.397841
CTCACAC249150.016.3828961
CGCTTCA199000.016.3599831
CTTAACT185500.016.3050771
GCGCGAT106000.016.276771
CAATGGA173700.016.258248
Produced by FastQC (version 0.11.5)