FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005092907

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005092907
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences37368737
Sequences flagged as poor quality0
Sequence length26
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGGACCT120400.017.6876411
GATGAAA114350.017.2500951
TGAGCCG112400.017.2467881
CAATGGA132600.017.1487648
CCGGGAT92650.016.9610041
TACGGAT118050.016.9043181
ACTGAAC95350.016.8688761
ATCGAGT99650.016.7633131
GGCGACT89300.016.7347761
GCGCGAT77300.016.6022871
TGGGCGT108600.016.5607741
TGCGGGT106800.016.4839841
TGCTACC135900.016.472571
CGTTGGG179200.016.4498861
ACTGATG82950.016.4120371
AGAAACC147100.016.4032758
ATCCGAA181000.016.402351
GTAACTG99600.016.3097551
CTAATGG115950.016.1925141
AGAGACT124450.016.166618
Produced by FastQC (version 0.11.5)