FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005092910

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005092910
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences53242238
Sequences flagged as poor quality0
Sequence length26
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGGACTG177900.017.5837571
GGGAGAT170550.017.3561341
ACTGAAC173500.017.2743641
ATCGAGT181000.017.2328571
GCGCGAT149200.017.204721
GACTAAC188650.017.138561
CTGATAG195300.017.1030641
GACTGCG222250.017.090651
GATCGCG184000.017.0878071
TGACTAG164300.017.0056461
GGGACCT130300.016.997811
ACTGATG149450.016.9617421
CCGGGAT142800.016.9460091
AGAAACC204600.016.9102448
TAACTGA117350.016.8123782
TCCGCGG162750.016.8102658
TGCCCTA232200.016.7503451
TACACGA165550.016.7020031
TGGCTGG185350.016.6826931
CACCGAA141800.016.6564778
Produced by FastQC (version 0.11.5)