FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005092918

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005092918
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences31565758
Sequences flagged as poor quality0
Sequence length26
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCTCGTTCGTTATCGGAATTAACCA1113770.3528412021659673No Hit
CGTTCGTTATCGGAATTAACCAGACA498570.15794646844850044No Hit
CCACCTACTAAGAACGGCCATGCACC415830.1317345206790219No Hit
CATGCCTGTGTTGGGTTGACAGTGAG399220.12647248958824306No Hit
CCTTTAAGTTTCAGCTTTGCAACCAT331260.10494283077250989No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)