FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005092921

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005092921
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences28813726
Sequences flagged as poor quality0
Sequence length8
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAGCGCTG830967928.83930734955972No Hit
TCCAATGC758049726.308631518186854No Hit
GTAGCACA632948621.966912574930433No Hit
CGTTTGAT622394521.600625340853174No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)