FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005092930

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005092930
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences34787421
Sequences flagged as poor quality0
Sequence length26
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGGACCT152450.018.1644421
ATGCGAT113650.017.7309551
TGCTACC161700.017.6448631
GACTAAC124500.017.6235661
GATCGCG127250.017.4784741
CCGGTAG147650.017.4748211
ACTGAAC114550.017.4519621
ATTGGTG135150.017.4483451
ATCGAGT124250.017.3370761
GCCGAAG105700.017.2952843
AAACCTG125650.017.263291
CCTTCCC185350.017.2333151
ATGAATG115700.017.20786510
GGAACTT147600.017.020011
CACACCT186300.016.9951341
CAATGAA99050.016.8197528
CCGGGAT78950.016.8091321
GGGAGAT103400.016.7708511
GGACCTA89850.016.7176042
GGTATTG117950.016.6860561
Produced by FastQC (version 0.11.5)