FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005092942

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005092942
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences39879027
Sequences flagged as poor quality0
Sequence length26
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGGGTGA266350.018.0196341
TGCTACC180850.017.6021611
GGGACCT123250.017.5922051
CTGCCTA199050.017.5653631
ACTGATG141700.017.5107541
CGATTGA151100.017.4870381
ATAGACC120250.017.2992061
GACCTGG149150.017.273111
GATGCTA167550.017.220641
CCGGGAT99450.017.186411
TTGACTT166450.017.1421741
ACGCCGA153250.017.117711
CCGGTAG130900.017.0377831
ATGCGAT106550.016.9892021
GACTAAC113150.016.9704971
GAATGAA130500.016.952061
CTGCGGA129550.016.8524951
AGATTGC133850.016.8416041
CCCTCCT184850.016.837131
CTCGAAA111400.016.7612741
Produced by FastQC (version 0.11.5)