FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005092948

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005092948
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences32329686
Sequences flagged as poor quality0
Sequence length26
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCTCGTTCGTTATCGGAATTAACCA1159000.35849404785434663No Hit
CGTTCGTTATCGGAATTAACCAGACA516270.15968914761498146No Hit
CCACCTACTAAGAACGGCCATGCACC439490.13594007686928972No Hit
CATGCCTGTGTTGGGTTGACAGTGAG410900.1270968112712261No Hit
CCTTTAAGTTTCAGCTTTGCAACCAT332620.10288377066204725No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)