FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005093020

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005093020
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9462358
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCTAGTC4800.08.99896575-79
CTAGTCC5200.08.58362875-79
CTAGATC7250.08.540754140-144
GGCTAGT6250.07.141577775-79
TAACTAG5306.1118044E-106.7928348135-139
GAGCTAG6251.2732926E-116.68083150-54
AGGCTAG6402.3646862E-116.5242575-79
AGCTAGA6301.05501385E-106.399264350-54
ACTAGAT7805.9117156E-105.5387726135-139
GCTAGAA9008.203642E-105.11941150-54
Produced by FastQC (version 0.11.5)