FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005093026

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005093026
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12743122
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA264050.05.628552140-144
TAGATCG82950.05.607758140-144
CACACGT167500.05.4338217140-144
ACACGTC162350.05.313463140-144
AGATCGG296650.05.2721605140-144
CACGTCT158750.05.0892324140-144
Produced by FastQC (version 0.11.5)