FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005093036

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005093036
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16218250
Sequences flagged as poor quality0
Sequence length150
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCACTCA44050.011.4482319
GCCACTC67700.07.34254658
GGCCTAA16550.06.349969475-79
AGCCACT85050.05.75997837
AAGCCAC96000.05.55317546
Produced by FastQC (version 0.11.5)