FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005093045

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005093045
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16826215
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACTATTC87750.07.54613074
CTATTCT93150.07.03132255
GATCTAG18500.06.537579580-84
GCTAGTC12850.06.05091775-79
CTACTAT99950.06.0489342
TCTACTA89900.05.76608851
TACTATT143900.05.0017753
Produced by FastQC (version 0.11.5)