FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005093363

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005093363
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18047327
Sequences flagged as poor quality0
Sequence length150
%GC53

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA266100.08.8828381
TCGGAAG270700.08.5635123
ATCGGAA308850.07.78543952
AGAGCGT305750.07.62878948
AAGAGCG355350.06.60447557
GAGCGTC359350.06.51029449
TAGATCT79000.06.25127140-44
CGGAAGA394050.06.0291894
GGAAGAG411750.05.8570145
GTGCACT83950.05.779839530-34
GAAGAGC432400.05.727146
Produced by FastQC (version 0.11.5)