FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005093374

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005093374
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15260099
Sequences flagged as poor quality0
Sequence length150
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTTGGGG100200.010.1589751
CTTGGGC118800.08.8744441
CTTGGGA81300.08.4961591
CTTGGGT52600.08.432061
CTTGGTA74200.08.0352531
CTTGGCA193450.07.6674511
GTTGGGA83850.07.2839311
CTTGGTG153950.07.08436871
CTTGCGA73250.07.0475851
TTGGGAT106750.06.81490952
GTTGCGA64550.06.7584111
CTTGGCC190600.06.63767431
CTTGGCG257900.06.62530851
CTTGAGA59750.06.57121131
CTTGGAT68850.06.2307121
CTTGGTC100400.06.1556621
CTTGTGA69350.05.97610141
CTTGTGG132900.05.96336131
CTTCCTA40405.456968E-125.9391211
CTTCCCA108300.05.84090761
Produced by FastQC (version 0.11.5)