FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005093394

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005093394
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12343538
Sequences flagged as poor quality0
Sequence length150
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGCATG37500.011.9019998
TAAGGGG40750.010.7760589
AGTGAGT43650.010.1581481
GTGAGTA44000.09.4930822
TTAGCAT84800.06.11217987
CTAGGAG15300.05.929812450-54
CCTTTAG80750.05.88348254
CTAGATC7952.7284841E-115.796929140-144
CTAGACC9500.05.76031120-124
AGATCGG119600.05.0935936140-144
Produced by FastQC (version 0.11.5)