FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005093442

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005093442
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17559091
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGTGAGT36750.07.3601841
CTAGATC13900.06.319738140-144
TACACTA45150.06.21786368
TAACCCC50750.05.9572749
GTGAGTA49800.05.78487352
CTACACT53050.05.69904337
TAGCATG38407.23594E-85.0613568
Produced by FastQC (version 0.11.5)