FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005093470

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005093470
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15556207
Sequences flagged as poor quality0
Sequence length150
%GC54

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA193700.06.04122451
AGAGCAC206300.06.0359958
TCGGAAG236500.05.88470273
CGAGTTA41350.05.81428630-34
AGTTAGC40700.05.76555135-39
GAGTTAG41100.05.709541330-34
GAGCACA203750.05.6522719
ATCGGAA253650.05.11724332
GGGGGGG41451.4728357E-85.0451242
Produced by FastQC (version 0.11.5)