FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005093503

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005093503
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14994683
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGTGAGT22550.017.1084351
GTGAGTA31350.012.6467382
TAACCCC40350.08.9215579
GTCTCTT67850.07.0806811
TGAGTAT79650.05.7885813
GAGTATA84500.05.7105784
ATAACCC76650.05.6357718
Produced by FastQC (version 0.11.5)