FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005093542

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005093542
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15476959
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAGCACA158300.09.3684089
AGAGCAC181750.07.92200478
GATCGGA204600.07.34284261
TCGGAAG234550.06.6065153
ATCGGAA247400.06.1760362
AAGAGCA255550.06.0568627
GGAAGAG305400.05.13896135
Produced by FastQC (version 0.11.5)