FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005093543

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005093543
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15476959
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA205450.07.2234581
TCGGAAG230950.06.5149353
AGAGCGT225550.06.3835038
ATCGGAA251700.06.18301632
AAGAGCG259550.05.85239127
GAGCGTC276000.05.45141369
ACACTCT55150.05.43492561
TGTGTAG59950.05.019499335-39
GGAAGAG308800.05.01236775
TAGATCT61500.05.01006940-44
Produced by FastQC (version 0.11.5)