FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005093564

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005093564
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17078213
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACTATA53300.09.3206929
AACACTA58700.08.2188087
ACACTAT56100.08.2146528
AAACACT92350.05.3800256
Produced by FastQC (version 0.11.5)