FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005093631

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005093631
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18377015
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGAGCGT237350.08.7162548
GATCGGA245650.08.293171
GAGCGTC274950.07.708269
AAGAGCG273200.07.6783957
TCGGAAG296450.06.97576763
TAGATCT67500.06.52610940-44
ATCGGAA332500.06.4882112
GAAGAGC348000.06.31898746
GGAAGAG367600.06.04109955
TGTGTAG81250.05.527944635-39
CGGAAGA433600.05.32329374
Produced by FastQC (version 0.11.5)