FastQCFastQC Report
Sat 11 May 2024
EGAF00005093952

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005093952
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17309667
Total Bases2.5 Gbp
Sequences flagged as poor quality0
Sequence length150
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG499710.28868839591194906No Hit
TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC387640.22394422723441185No Hit
GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA362520.20943210519301153No Hit
AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA290690.16793506195122068No Hit
GAAAAAGTTAAAGAAGATAGAAACCAACCTGGCTTATACCGGTTTGAACT192190.11103044327773608No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)