FastQCFastQC Report
Sat 11 May 2024
EGAF00005093953

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005093953
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17309667
Total Bases2.5 Gbp
Sequences flagged as poor quality0
Sequence length150
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG620950.3587301823888351No Hit
GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA463680.2678734374266125No Hit
AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA379620.2193109780794743No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)