FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005093995

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005093995
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13705128
Sequences flagged as poor quality0
Sequence length150
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGTGAGT46600.018.0061171
TAGCCCC48200.016.1325159
GTGAGTA53800.014.7280422
GTATAGC95250.08.8438846
AGTATAG97650.08.4041355
ATAGCCC97350.08.3573368
TATAGCC103800.07.97668937
GAGTATA132200.06.3711064
TGAGTAT138200.06.042393
CGCCTAA35700.05.121988345-49
Produced by FastQC (version 0.11.5)