FastQCFastQC Report
Sat 11 May 2024
EGAF00005094018

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005094018
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15525871
Total Bases2.3 Gbp
Sequences flagged as poor quality0
Sequence length150
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACAGGCTAACATCTCGTAT238850.15384000034523024TruSeq Adapter, Index 13 (97% over 37bp)
TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC173990.11206456629711788No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)