FastQCFastQC Report
Thu 9 May 2024
EGAF00005094069

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005094069
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18642903
Total Bases2.7 Gbp
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG516750.27718322623896074No Hit
GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA345310.1852232991825361No Hit
AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA280500.15045940001940683No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)