FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005094182

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005094182
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15005234
Sequences flagged as poor quality0
Sequence length150
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTAGATG9400.00234377457.65882446
TACCCTA24753.4537334E-76.1085954
ACCCTAA29451.5026471E-65.37808135
GTCCTTA45801.3005774E-95.0325743
Produced by FastQC (version 0.11.5)