FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005094204

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005094204
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13350215
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAGCACA150500.010.1394549
AGAGCAC159000.09.2352418
GATCGGA214700.07.3719381
AAGAGCA236750.06.65839157
TCGGAAG259300.06.4256243
ATCGGAA278850.06.23379042
GAAGAGC275400.05.9069016
GGAAGAG317200.05.26465565
Produced by FastQC (version 0.11.5)