FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005094205

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005094205
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13350215
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGAGCGT189450.07.4859148
GATCGGA215150.06.6719451
GAGCGTC213300.06.6159499
AAGAGCG226200.06.52553137
TCGGAAG252650.05.78621863
GAAGAGC272400.05.57737646
ATCGGAA270950.05.3695222
Produced by FastQC (version 0.11.5)