FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005094248

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005094248
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15138718
Sequences flagged as poor quality0
Sequence length150
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAGCACA156000.07.3365769
AGAGCAC179800.06.2453158
CACTATA43050.06.0193599
AACACTA38205.820766E-115.8414117
ACACTAT38356.366463E-115.8185638
GATCGGA213450.05.67142721
ATCGGAA253250.05.1256382
Produced by FastQC (version 0.11.5)