FastQCFastQC Report
Sat 11 May 2024
EGAF00005094253

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005094253
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15487556
Total Bases2.3 Gbp
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG419220.2706818299801466No Hit
GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA268440.17332624979693373No Hit
AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA198100.12790914202344128No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)