FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005094254

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005094254
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15788347
Sequences flagged as poor quality0
Sequence length150
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCCTAGT5009.0842124E-411.521632
CTAGACC5900.07.81114675-79
ACTAGAC7350.06.85621570-74
GCACTAG6751.8189894E-126.61243870-74
CACTAGA8652.8012437E-105.326446570-74
Produced by FastQC (version 0.11.5)